72 lines
		
	
	
		
			2.8 KiB
		
	
	
	
		
			Python
		
	
	
	
	
	
			
		
		
	
	
			72 lines
		
	
	
		
			2.8 KiB
		
	
	
	
		
			Python
		
	
	
	
	
	
"""
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This code is supported by the website: https://www.guanjihuan.com
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The newest version of this code is on the web page: https://www.guanjihuan.com/archives/10909
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"""
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import numpy as np
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import copy
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import matplotlib.pyplot as plt
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from math import *
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def main():
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    x_array = np.arange(-20, 20.1)
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    y_array = np.arange(-20, 20.1)
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    coordinates = []
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    for x in x_array:
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        for y in y_array:
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            coordinates.append([0+x*3, 0+y*np.sqrt(3)])
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            coordinates.append([1+x*3, 0+y*np.sqrt(3)])
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            coordinates.append([-1/2+x*3, np.sqrt(3)/2+y*np.sqrt(3)])
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            coordinates.append([-3/2+x*3, np.sqrt(3)/2+y*np.sqrt(3)])
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    x_range1 = max(np.array(coordinates)[:, 0])-min(np.array(coordinates)[:, 0])
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    y_range1 = max(np.array(coordinates)[:, 1])-min(np.array(coordinates)[:, 1])
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    theta = -1.1/180*pi
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    rotation_matrix = np.zeros((2, 2))
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    rotation_matrix[0, 0] = np.cos(theta)
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    rotation_matrix[1, 1] = np.cos(theta)
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    rotation_matrix[0, 1] = -np.sin(theta)
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    rotation_matrix[1, 0] = np.sin(theta)
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    coordinates2 = copy.deepcopy(coordinates)
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    for i in range(len(coordinates)):
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        coordinates2[i] = np.dot(rotation_matrix, coordinates[i])
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    x_range2 = max(np.array(coordinates2)[:, 0])-min(np.array(coordinates2)[:, 0])
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    y_range2 = max(np.array(coordinates2)[:, 1])-min(np.array(coordinates2)[:, 1])
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    x_range = max([x_range1, x_range2])
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    y_range = max([y_range1, y_range2])
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    fig, ax = plt.subplots(figsize=(9*x_range/y_range,9))
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    plt.subplots_adjust(left=0.05, bottom=0.05, right=0.95, top=0.95)
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    plt.axis('off')
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    plot_dots_1(ax, coordinates)
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    plot_dots_2(ax, coordinates2)
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    plot_dots_0(ax, [[0, 0]])
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    plt.savefig('twist_graphene.eps') 
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    plt.show()
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def plot_dots_0(ax, coordinates):
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    for i in range(len(coordinates)):
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        ax.plot(coordinates[i][0], coordinates[i][1], 'ko', markersize=0.5)
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def plot_dots_1(ax, coordinates):
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    for i1 in range(len(coordinates)):
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        for i2 in range(len(coordinates)):
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            if np.sqrt((coordinates[i1][0] - coordinates[i2][0])**2+(coordinates[i1][1] - coordinates[i2][1])**2) < 1.1:
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                ax.plot([coordinates[i1][0], coordinates[i2][0]], [coordinates[i1][1], coordinates[i2][1]], '-k', linewidth=0.2)
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    for i in range(len(coordinates)):
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        ax.plot(coordinates[i][0], coordinates[i][1], 'ro', markersize=0.5)
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def plot_dots_2(ax, coordinates):
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    for i1 in range(len(coordinates)):
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        for i2 in range(len(coordinates)):
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            if np.sqrt((coordinates[i1][0] - coordinates[i2][0])**2+(coordinates[i1][1] - coordinates[i2][1])**2) < 1.1:
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                ax.plot([coordinates[i1][0], coordinates[i2][0]], [coordinates[i1][1], coordinates[i2][1]], '--k', linewidth=0.2)
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    for i in range(len(coordinates)):
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        ax.plot(coordinates[i][0], coordinates[i][1], 'bo', markersize=0.5)    
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if __name__ == '__main__':
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    main() |